Saturday, April 7, 2012

Fwd: Bioconductor to annotate Variants (tutorial)

Fwd: please follow footer link

The VariantAnnotation package has facilities for reading in all or portions of Variant Call Format (VCF) files. Structural location information can be determined as well as amino acid coding changes for the non-synonymous variants. Consequences of the coding changes can be investigated with the SIFT and PolyPhen database packages.

(Original Post:
Bioconductor - Variants.)